lamindb.core.datasets¶
Test collections.
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Example FCS artifact. |
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FCS file from Alpert19. |
Gene counts table from nf-core RNA-seq pipeline. |
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Return jpg file example. |
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Image file from Suo22. |
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Mini mock fastq artifact. |
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Mini mock bam artifact. |
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Mini csv artifact. |
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Generate mock cell ranger outputs. |
Directory with 3 studies of the Iris flower: 405 images & metadata. |
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The iris collection as in sklearn. |
The iris collection with lengths in meter. |
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The iris collection with lengths in meter. |
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The iris collection with lengths in meter. |
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Mouse lymph node scRNA-seq collection from EBI. |
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Cross-tissue immune cell analysis reveals tissue-specific features in humans. |
Modified from scanpy.collections.pbmc68k_reduced(). |
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Modified from scanpy.collections.pbmc68k_reduced(). |
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Modified from scanpy.pbmc3k_processed(). |
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Create a mini anndata with cell_type, disease and tissue. |
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AnnData from Suo22 generated by 10x Visium. |
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A subsetted mudata from papalexi21. |
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CRISPRi screen collection of Schmidt22. |
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Perturb-seq collection of Schmidt22. |
A fake collection of study titles. |